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	Standalone Version
			Standalone Version
			Menu - File:   As input GeneNetFinder takes either gene expression data or regulation rules. Load gene expression data: load the raw value of gene expression data in text file. Load regulation rules: load regulation rules of gene regulatory networks in .rule format. Exit: Quit the program. Menu - Operations:   After loading the gene expression data, click "Visualize identified gene regulations" to visualize a gene regulatory network. GeneNet Finder provides two layout methods: Grid Layout: gene regulatory network as an orthogonal drawing with nodes in grid points. Layered layout: gene regulatory network as a layered graph. Circular layout: visualizing gene regulatory networks in circle. Click "Save image as" to save your visualization.   Menu - Data:   Click "Analyze input data" to analyze the gene expression data. The menu "Identified gene regulations" shows the identified gene regulations from the input data. Save identified regulations as: save your result. Menu - Options:   View regulations identified: show or hide the regulations identified panel. View Node list: show or hide the node list listbox. Setting: more settings of GeneNet Finder. Menu - Setting:   Some settings of GeneNet Finder Show identified regulations: set/unset the default setting of the regulations identified panel. Show node list: set/unset the default setting of the node list listbox. Show edge labels: set/unset the default setting of edge labels. Interface:      Analysis of gene expression data     Setting time points     Identified gene regulations     Identified gene regulations with multiple regulators   Gene regulations in the dataset of genes in the yeast cell cycle     Gene regulations in the dataset of genes in the human cell cycle   Recommended operational process:   File -> Load gene expression data -> Operations -> Visualize identified regulations -> Save (image/regulations)   File -> Load regulation rules -> Layout -> Grid layout/ Circular layout -> File -> Save as image
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