Additional file 1: 752 breast cancer patients and their subtypes

wtTP53: a group of 397 patients with a wild-type TP53 gene. mTP53: a group of 355 patients with somatic mutations in the TP53 gene.

Additional file 1.xlsx

Additional file 2: Gene pairs with differential co-expressions in wtTP53 and mTP53

All gene pairs that were differentially co-expressed in wtTP53 and mTP53.

Additional file 2.xlsx

Additional file 3: Concordance indexes and fold changes

The concordance indexes computed for core genes and their fold changes between the two groups (wtTP53 and mTP53) on a log2 scale.

Additional file 3.xlsx

Additional file 4: Results of the log rank test

Due to the file size, this additional file shows the result of the log rank test for 100 combinations out of a total of ~ 1,000,000 combinations of genes. The p-values appear in the file log rank test.xlsx, and the result of clustering by each combination of genes appear in the file log rank test clusters.xlsx

Additional file 4.zip

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